Collaborating with the best in the field

We have worked with dozens of researchers and proven the value of our ANIE (Advanced Neuro Imaging Endpoints) biomarker platform.

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ANDI
Traumatic brain injury
Alzheimer’s disease
Multiple sclerosis

Publications using Imeka’s technology and services

Roy M, Fortier M, Rheault F, Edde M, Croteau E, Castellano CA, Langlois F, St-Pierre V, Cuenoud B, Bocti C, Fulop T, Descoteaux M, Cunnane SC. A ketogenic supplement improves white matter energy supply and processing speed in mild cognitive impairment. Alzheimers Dement (NY). 2021;7(1):e12217.

Theaud G, Houde J-C, Boré A, Rheault F, Morency F, Descoteaux M. TractoFlow: a robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity. Neuroimage. 2020;218.

Roy M, Dumont M, Houde J-C, Morency F, Descoteaux M. Longitudinal assessment of neuroinflammation and axonal loss in white matter tracts in Alzheimer’s disease. Alzheimer’s Association International Conference (AAIC) Virtual Event. July 2020.

Dumont M, Roy M, Jodoin P-M, Morency FC, Houde J-C, Xie Z, Bauer C, Samad TA, Van Dijk KRA, Goodman JA, Descoteaux M. Free water in white matter differentiates MCI and AD from control subjects. Front Aging Neurosci. October 2019.

Pichet Binette A, Theaud G, Rheault F, Roy M, Collins DL, Levin J, Mori H, Lee J-H, Rhys Farlow M, Schofield P, Chhatwal JP, Masters C, Benzinger T, Morris JC, Bateman R, Breitner JCS, Poirier J, Gonneaud J, Descoteaux M, Villeneuve S, for the DIAN Study Group and the PREVENT-AD Research Group. Bundle-specific associations between white matter microstructure and Aβ and tau pathology in preclinical Alzheimer’s disease. Elife. 2021.

Roy M, Fortier M, Rheault F, Edde M, Croteau E, Castellano C-A, Langlois F, St-Pierre V, Cuenoud B, Bocti C, Fulop T, Descoteaux M, Cunnane SC. A ketogenic supplement improves white matter energy supply and processing speed in mild cognitive impairment. 2021.

Edde M, Theaud G, Rheault F, Dilharreguy B, Helmer C, Dartigues J-F, Amieva H, Allard M, Descoteaux M, Cathelin G. Free water: a marker of age-related modifications of the cingulum white matter and its association with cognitive decline. PLoS One. 2020;15(11).

Papadopoulou A, Gaetano L, Pfister A, Altermatt A, Tsagkas C, Morency F, Brandt AU, Hardmeier M, Chakravarty MM, Descoteaux M, Kappos L, Sprenger T, Magon S. Damage of the lateral geniculate nucleus in MS. Neurology. 2019;92(19).

Beaudoin A-M, Rheault F, Theaud G, Laberge F, Whittingstall K, Lamontagne A, Descoteaux M. Modern technology in multi-shell diffusion MRI reveals diffuse white matter changes in young adults with relapsing-remitting multiple sclerosis. Frontiers Neurosci. 2021;15.

Nagano-Saito A, Houde J-C, Bedetti C, Descoteaux M, Leyton M, Benkelfat C, Monchi O. Reorganisation of diffusion microstructure in the precuneus is associated with preserved cognitive function in Parkinson’s disease. 2021.

Hanganu A, Houde J-C, Fonov VS, Degroot C, Mejia-Constain B, Lafontaine A-L, Soland V, Chouinard S, Collins LD, Descoteaux M, Monchi O. White matter degeneration profile in the cognitive cortico-subcortical tracts in Parkinson’s disease. Mov Disord. 2018;33(7):1139–1150.

Obaid S, Tucholka A, Ghaziri J, Jodoin P-M, Morency F, Descoteaux M, Bouthillier A, Nguyen DK. Cortical thickness analysis in operculo-insular epilepsy. NeuroImage: Clin. 2018;19:727–733.

Cousineau M, Jodoin P-M, Morency FM, Rozanski V, Grand’Maison M, Bedell BJ, Descoteaux M. A test-retest study on Parkinson’s PPMI dataset yields statistically significant white matter fascicles. NeuroImage: Clin. 2017;16:222–233.

Nasir Uddin M, Faiyaz A, Wang L, Zhuang Y, Murray KD, Descoteaux M, Tivarus ME, Weber MT, Zhong J, Qiu X, Schiftto G. A longitudinal analysis of brain extracellular free water in HIV infected individuals. Sci Rep. 2021;11(1).

Vanderweyen DC, Theaud G, Sidhu J, Rheault F, Sarubbo S, Descoteaux M, Fortin D. The role of diffusion tractography in refining glial tumor resection. Brain Struct Funct. 2020;225(4):1413–1436.

Mandonnet E, Vincent M, Valero-Cabre A, Facque V, Barberis M, Bonnetblanc F, Rheault F, Volle E, Descouteaux M, Margulies DS. Network-level causal analysis of set-shifting during trail making test part B: A multimodal analysis of a glioma surgery case. Cortex. 2020;132:238–249.

Guberman GI, Stojanovski S, Nishat E, Ptito A, Bzdok D, Wheeler A, Descoteaux M. Multi-tract multi-symptom relationships in pediatric concussions. 2021.

Marcotte K, Sancheza E, Arboura C, Brambatie SM, Bedettie C, Martineau S, Descoteaux M, Gosselina N. Long-term discourse outcomes and their relationship to white matter damage in moderate to severe adulthood traumatic brain injury. Brain Lang. 2020;204.

Brandao P, Jovem C, Brasil-Neto JP, Tomaz C, Descoteaux M, Allam N. Congenital mirror movements: lack of decussation of pyramids. Brain. 2014;137(8):e292.

Publications from collaborators and Sherbrooke Connectivity Imaging Lab (SCIL)

Théberge A, Desrosiers C, Descoteaux M, Jodoin P-M. Track-to-learn: a general framework for tractography with deep reinforcement learning. Med Image Anal. 2021;72.

Pichet Binette A, Theaud G, Rheault F, Roy M, Collins DL, Levin J, Mori H, Hong Lee J, Rhys Farlow M, Schofield P, Chhatwal JP, Masters CL, Benzinger T, Morris J, Bateman R, Breitner JCS, Poirier J, Gonneaud J, Descoteaux M, Villeneuve S, DIAN Study Group and the PREVENT-AD Research Group. Bundle-specific associations between white matter microstructure and Aβ and tau pathology in preclinical Alzheimer’s disease. Elife. 2021.

Nasir Uddin M, Faiyaz A, Wang L, Zhuang Y, Murray KD, Descoteaux M, Tivarus ME, Weber MT, Zhong J, Qiu X, Schifitto G. A longitudinal analysis of brain extracellular free water in HIV infected individuals. Sci Rep. 2021;11.

Roy M, Rheault F, Croteau E, Castellano C-A, Fortier M, St-Pierre V, Houde J-C, Turcotte ÉE, Bocti C, Fulop T, Cunnane SC, Descoteaux M. Fascicle- and glucose-specific deterioration in white matter energy supply in Alzheimer’s disease. J Alzheimers Dis. 2020;76(3)863–881.

Nolze-Charron G, Dufort-Rouleau R, Houde J-C, Dumont M, Castellano C-A, Cunnane S, Lorrain D, Fülöp T, Descoteaux M, Bocti C. Tractography of the external capsule and cognition: A diffusion MRI study of cholinergic fibers. Exp Gerontol. 2020;130.

Rheault F, De Benedictis A, Daducci A, Maffei C, Tax CMW, Romascano D, Caverzasi E, Morency FC, Corrivetti F, Pestilli F, Girard G, Theaud G, Zemmoura I, Hau J, Glavin K, Jordan KM, Pomiecko K, Chamberland M, Barakovic M, Goyette N, Poulin P, Chenot Q, Panesar SS, Sarubbo S, Petit L, Descoteaux M. Tractostorm: the what, why, and how of tractography dissection reproducibility. Hum Brain Mapp. 2020.

Rheault F, Poulin P, Valcourt Caron A, St-Onge E, Descoteaux M. Common misconceptions, hidden biases and modern challenges of dMRI tractography. J Neural Eng. 2020;17(1).

Deslauriers-Gauthier S, Lina J-M, Butler R, Whittingstall K, Gilbert G, Bernier P-M, Deriche R, Descoteaux M. White matter information flow mapping from diffusion MRI and EEG. Neuroimage. 2019;201.

Potvin O, Chouinard I, Dieumegarde L, Bartha R, Bellec P, Collins DL, Descoteaux M, Hoge R, Ramirez J, Scott CJ, Smith EE, Strother SC, Black SE, Duchesne S. The Canadian Dementia Imaging Protocol: harmonization validity for morphometry measurements. NeuroImage: Clin. 2019;24.

Chamberland M, Raven EP, Genc S, Duffy K, Descoteaux M, Parker GD, Tax CMW, Jones DK. Dimensionality reduction of diffusion MRI measures for improved tractometry of the human brain. Neuroimage. 2019;200.

Fortier M, Castellano C-A, Croteau E, Langlois F, Bocti C, St-Pierre V, Vandenberghe C, Bernier M, Roy M, Whittingstall K, Lepage M, Turcotte EE, Fulop T, Cunnane SC. A ketogenic drink improves brain energy and some measures of cognition in MCI. Alzheimers Dement. 2019;15(5):625–634.

Schilling KG, Daducci A, Maier-Hein K, Poupon C, Houde J-C, Nath V, Anderson AW, Landman BA, Descoteaux M. Challenges in diffusion MRI tractography – Lessons learned from international benchmark competitions. Magn Reson Imaging. 2019;57.

Boukadi M, Marcotte K, Bedetti C, Houde J-C, Desautels A, Deslauriers-Gauthier S, Chapleau M, Bore A, Descoteaux M, Brambati SM. Test-retest reliability of diffusion measures extracted along white matter language fiber bundles using HARDI-based tractography. Front Neurosci. 2019;12.

Sanchez E, El-Khatib H, Arbour C, Bedetti C, Blais H, Marcotte K, Baril A-A, Descoteaux M, Gilbert D, Carrier J, Gosselin N. Brain white matter damage and its association with neuronal synchrony during sleep. Brain. 2019;142(3):674–687.

Rheault F, St-Onge E, Sidhu J, Maier-Hein K, Tzourio-Mazoyer N, Petit L, Descoteaux M. Bundle-specific tractography with incorporated anatomical and orientational priors. Neuroimage. 2019;186:382–398.

Schilling KG, Nath V, Hansen C, Parvathaneni P, Blaber J, Gao Y, Neher P, Aydogan DB, Shi Y, Ocampo-Pineda M, Schiavi S, Daducci A, Girard G, Barakovic M, Rafael-Patino J, Romascano D, Rensonnet G, Pizzolato M, Bates A, Fischi E, Thiran J-P, Canales-Rodriguez EJ, Huang C, Zhu H, Zhong L, Cabeen R, Toga AW, Rheault F, Theaud G, Houde J-C, Sidhu J, Chamberland M, Westin C-F, Dyrby TB, Verma R, Rathi Y, Irfanoglu MO, Thomas C, Pierpaoli C, Descoteaux M, Anderson AW, Landman BA. Limits to anatomical accuracy of diffusion tractography using modern approaches. Neuroimage. 2019;185:1–11.

Theaud G, Houde J-C, Sidhu J, Chamberland M, Westin C-F, Dyrby TB, Verma R, Rathi Y, Irfanoglu MO, Thomas C, Pierpaoli C, Descoteaux M, Anderson AW, Landman BA. Limits to anatomical accuracy of diffusion tractography using modern approaches. Neuroimage. 2019;185:1–11.

Najdenovska E, Alemán-Gómez Y, Battistella G, Descoteaux M, Hagmann P, Jacquemont S, Maeder P, Thiran J-P, Fornari E, Cuadra MB. In-vivo probabilistic atlas of human thalamic nuclei based on diffusion-weighted magnetic resonance imaging. Sci Data. 2018;5.

Rheault F, Roy M, Cunnane S, Descoteaux M. Bundle-specific fornix reconstruction for dual-tracer PET-tractometry. bioRxiv. 2018.

Constanzo J, Dumont M, Lebel R, Tremblay L, Whittingstall K, Masson-Côté L, Geha S, Sarret P, Lepage M, Paquette B, Descoteaux M. Diffusion MRI monitoring of specific structures in the irradiated rat brain. Magn Reson Med. 2018;80(4)1614–1625.

Lefebvre J, Delafontaine-Martel P, Pouliot P, Girouard H, Descoteaux M. Fully automated dual-resolution serial optical coherence tomography aimed at diffusion MRI validation in whole mouse brains. Neurophotonics. 2018;5(4).

Ghaziri J, Tucholka A, Girard G, Boucher O, Houde J-C, Descoteaux M, Obaid S, Gilbert G, Rouleau I, Nguyen DK. Subcortical structural connectivity of insular subregions. Sci Rep. 2018;8(1):8596.

Zhang Z, Descoteaux M, Zhang J, Girard G, Chamberland M, Dunson D, Srivastava A, Zhu H. Mapping population-based structural connectomes. Neuroimage. 2018;172.

Tremblay P, Perron M, Deschamps I, Kennedy-Higgins D, Houde J-C, Dick AS, Descoteaux M. The role of the arcuate and middle longitudinal fasciculi in speech perception in noise in adulthood. Hum Brain Mapp. 2018;40(1).

Bizeau A, Gilbert G, Bernier M, Huynh MT, Bocti C, Descoteaux M, Whittingstall K. Stimulus-evoked changes in cerebral vessel diameter: a study in healthy humans. J Cereb Blood Flow Metab. 2018;38(3):528–539.

Garyfallidis E, Côté M-A, Rheault F, Sidhu J, Hau J, Petit L, Fortin D, Cunanne S, Descoteaux M. Recognition of white matter bundles using local and global streamline-based registration and clustering. Neuroimage. 2018;170:283–295.

St-Onge E, Daducci A, Girard G, Descoteaux M. Surface-enhanced tractography (SET). Neuroimage. 2018;169:524–539.

Jeurissen B, Descoteaux M, Mori S, Leemans A. Diffusion MRI fiber tractography of the brain. NMR Biomed. 2017.

Chamberland M, Girard G, Bernier M, Fortin D, Descoteaux M, Whittingstall K. On the origin of individual functional connectivity variability: the role of white matter architecture. Brain Connect. 2017;7(8):491–503.

Girard G, Daducci A, Petit L, Thiran J-P, Whittingstall K, Deriche R, Wassermann D, Descoteaux M. AxTract: toward microstructure informed tractography. Hum Brain Mapp. 2017;38(11):5485–5500.

Rozanski VE, da Silva NM, Ahmadi S-A, Mehrkens J, da Silva Cunha J, Houde J-C, Vollmar C, Bötzel K, Descoteaux M. The role of the pallidothalamic fibre tracts in deep brain stimulation for dystonia: a diffusion MRI tractography study. Hum Brain Mapp. 2017;38(3).

Butler R, Gilbert G, Descoteaux M, Bernier P-M, Whittingstall K. Application of polymer sensitive MRI sequence to localization of EEG electrodes. J Neurosci Methods. 2016;278:36–45.

Garyfallidis E, Brett M, Amirbekian B, Rokem A, van der Walt S, Descoteaux M, Nimmo-Smith I. Dipy, a library for the analysis of diffusion MRI data. Front Neuroinform. 2014;8.

Girard G, Whittingstall K, Deriche R, Descoteaux M. Towards quantitative connectivity analysis: reducing tractography biases. Neuroimage. 2014;98:266–278.

Whittingstall K, Bernier M, Houde J-C, Fortin D, Descoteaux M. Structural network underlying visuospatial imagery in humans. Cortex. 2014;56.

Chamberland M, Whittingstall K, Fortin D, Mathieu D, Descoteaux M. Real-time multi-peak tractography for instantaneous connectivity display. Front Neuroinform. 2014;8(59).

Vigneau-Roy N, Bernier M, Descoteaux M, Whittingstall K. Regional variations in vascular density correlate with resting-state and task-evoked BOLD signal amplitude. Hum Brain Mapp. 2014;35(5):1906–1920.

Fortin D, Aubin-Lemay C, Boré A, Girard G, Houde J-C, Whittingstall K, Descoteaux M. Tractography in the study of the human brain: a neurosurgical perspective. Can J Neurol Sci. 2012;39(6):747–756.

Delmaire C, Vidailhet M, Wassermann D, Descoteaux M, Valabregue R, Bourdin F, Lenglet C, Sangla S, Terrier A, Deriche R, Lehéricy S. Diffusion abnormalities in the primary sensorimotor pathways in writer’s cramp. Arch Neurol. 2009;66(4):502–508.

Descoteaux M, Deriche R, Knosche T, Anwander A. Deterministic and probabilistic tractography based on complex fibre orientation distributions. IEEE Trans Med Imaging. 2009;28(2):269–286.

Cohen-Adad J, Descoteaux M, Rossignol S, Hoge RD, Deriche R, Benali H. Detection of multiple pathways in the spinal cord using q-ball imaging. Neuroimage. 2008;42(2):739–749.

Obaid S, Rheault F, Edde M, Guberman GI, St-Onge E, Sidhu J, Bouthillier A, Daducci A, Ghaziri J, Bojanowski MW, Nguyen DK, Descoteaux M. Structural connectivity alterations in operculo-insular epilepsy. Brain Sci. 2021;11(8).

Publications from collaborators and Video & Image Theory and Analytics Laboratory (VITAL)

Kim BN, Dolz J, Jodoin P-M, Desrosiers C. Privacy-net: an adversarial approach for identity-obfuscated segmentation of medical images. IEEE Trans Med Imaging. 2021.

Painchaud N, Skandarani Y, Judge T, Bernard O, Lalande A, Jodoin P-M. Cardiac segmentation with strong anatomical guarantees. In press at IEEE Trans Med Imaging. 2020.

Leclerc S, Smistad E, Østvik A, Cervenansky F, Espinosa F, Espeland T, Berg EAR, Grenier T, Lartizien C, Jodoin P-M, Lovstakken L, Bernard O. LU-net: a multi-task network to improve the robustness of deep learning segmentation in 2d echocardiography. In press at IEEE Trans Ultrason Ferroelectr Freq Control. 2020.

Poulin P, Jörgens D, Jodoin P-M, Descoteaux M. Tractography and machine learning: current state and open challenges. Magnetic Resonance Imaging. 2019;64:37–48.

Bojorquez JAZ, Jodoin P-M, Bricq S, Walker PM, Brunotte F, Lalande A. Automatic classification of tissues on prostate MRI based on relaxation times and support vector machine. PLoS One. 2019;14(2):e0211944.

Leclerc S, Smistad E, Pedrosa J, Ostvik A, Espinosa F, Espeland T, Rye Berg EA, Jodoin P-M, Grenier T, Lartizien C, D’hooge J, Lovstakken L, Bernard O. Deep learning for segmentation using an open large-scale dataset in 2D echocardiography. IEEE Trans Med Imaging. 2019.

Zotti C, Luo Z, Lalande A, Jodoin P-M. Convolutional neural network with shape prior applied to cardiac MRI segmentation. IEEE J Biomed Health Inform. 2019;23(3):1119–1128.

Luo Z, Branchaud-Charron F, Lemaire C, Konrad J, Li S, Mishra A, Achkar A, Eichel J, Jodoin P-M. MIO-TCD: a new benchmark dataset for vehicle classification and localization. IEEE Trans Image Process. 2018;27(10):5129–5141.

Bernard O, Lalande A, Zotti C, Cervenansky F, Yang X, Heng P-A, Cetin I, Lekadir K, Camara O, Gonzalez-Ballester MA, Sanroma G, Napel S, Petersen S, Tziritas G, Grinias E, Khened M, Kollerathu VA, Krishnamurthi G, Rohé M-M, Pennec X, Sermesant M, Isensee F, Jager P, Maier-Hein KH, Baumgartner CF, Koch LM, Wolterink JM, Isgum I, Jang Y, Hong Y, Patravali J, Jain S, Humbert O, Jodoin P-M. Deep learning techniques for automatic MRI cardiac multi-structures segmentation and diagnosis: is the problem solved?. IEEE Trans Med Imaging. 2018;37(11):2514–2525.

Obaid S, Tucholka A, Ghaziri J, Jodoin P-M, Morency F, Descoteaux M, Bouthillier A, Nguyen DK. Cortical thickness analysis in operculo-insular epilepsy. NeuroImage: Clin. 2018;19:727–733.

Luo Z, Jodoin P-M, Su S-Z, Li S, Larochelle H. Traffic analytics with low-frame-rate videos. IEEE Trans Circuits Syst Video Technol. 2018;28(4):878–891.

Cousineau M, Jodoin P-M, Morency FM, Rozanski V, Grand’Maison M, Bedell BJ, Descoteaux M. A test-retest study on Parkinson’s PPMI dataset yields statistically significant white matter fascicles. NeuroImage: Clin. 2017;16:222–233.

Jodoin P-M, Maddaelena L, Petrosino A, Wang Y. Extensive benchmark and survey of background modeling methods. IEEE Trans Image Process. 2017;26(11):5244–5256.

Bernier M, Jodoin P-M, Humbert O, Lalande A. Graph cut-based method for segmenting the left ventricle from MRI or echocardiographic images. Comput Medical Imaging Graph. 2017;58:1–12.

Havaei M, Davy A, Warde-Farley D, Biard A, Courville A, Bengio Y, Pal C, Jodoin P-M, Larochelle H. Brain tumor segmentation with deep neural networks. Med Image Anal. 2017;35:18–31.

Wang Y, Piérard S, Su S-Z, Jodoin P-M. Improving pedestrian detection using motion-guided filtering. Pattern Recognit Lett. 2017;96:106–112.

Wang Y, Luo Z, Jodoin P-M. Interactive deep learning method for segmenting moving objects. Pattern Recognit Lett. 2017;96:66–75.

Castanon G, Elgharib M-A, Saligrama V, Jodoin P-M. Retrieval in long-surveillance videos using user-described motion and object attributes. IEEE Trans Circuits Syst Video Technol. 2016;26(12):2313–2327.

Havaei M, Larochelle H, Poulin P, Jodoin P-M. Within-brain classification for brain tumor segmentation. Int J Comput Assist Radiol Surg. 2016;11(5):777–788.

Geng L-C, Jodoin P-M, Su S-Z, Li S. CBDF: compressed binary discriminative feature. Neurocomputing. 2016;184(5)43–54.

Zhang D, Jodoin P-M, Li C, Cai G, Wu Y. Novel graph cuts method for multi-frame super resolution. IEEE Signal Process Lett. 2015;22(12):2279–2283.

Jodoin P-M, Pinheiro F, Oudot F, Lalande A. Left-ventricle segmentation of SPECT images of rats. IEEE Trans Biomed Eng. 2015;62(9):2260–2268.

Presseau C, Jodoin P-M, Descoteaux M. A new compression format for fiber tracking datasets. Neuroimage. 2015;109:73–83.

Boisvert J, Drouin M-A, Jodoin P-M. High-speed transition patterns for video projection, 3D reconstruction, and copyright protection. Pattern Recognit. 2015;48(3):720–731.

Goyette N, Jodoin P-M, Porikli F, Konrad J, Ishwar P. Novel dataset for change detection benchmarking. IEEE Trans Image Process. 2014;23(11):4663–4679.

Cai G, Jodoin P-M, Li S, Wu Y-D, Su S-Z, Huang Z-K. Perspective-SIFT: an efficient tool for low-altitude remote sensing image registration. Signal Process. 2013;93(11):3088–3110.

Jodoin P-M, Saligrama V, Konrad J. Behavior Subtraction. IEEE Trans Image Process. 2012;21(9):4244–4255.

Adam-Duquette A, Jodoin P-M, Bouchot O, Lalande A. 3D segmentation of abdominal aorta from CT-scan and MR images. Comput Med Imaging Graph. 2012;36(4):294–303.

Drouin M-A, Jodoin P-M, Prémont J. Camera-projector matching using unstructured video. Mach Vision Appl. 2012;23(5):887–902.

Caron A, Jodoin P-M. Image multidistortion estimation. IEEE Trans Image Process. 2011;20(12):3442–3454.

Benezeth Y, Jodoin P-M, Saligrama V. Abnormality detection using low-level co-occurring events. Pattern Recognit Lett. 2011;32(3):423–431.

Ermis EB, Clarot P, Jodoin P-M, Saligrama V. Activity based matching in distributed camera networks. IEEE Trans Image Process. 2010;19(10):2595–2613.

Saligrama V, Konrad J, Jodoin P-M. A statistical approach to video anomaly identification. IEEE Signal Process Mag. 2010;27(5):18–33.

Benezeth Y, Jodoin PM, Emile B, Laurent H, Rosenberger C. Comparative study of background subtraction algorithms. J Electron Imaging. 2010;19(3):1–12.

McHugh M, Konrad J, Saligrama V, Jodoin P-M. Foreground-adaptive background subtraction. IEEE Signal Process Lett. 2009;16(5):390–393.

Jodoin P-M, Mignotte M. Optical-flow based on an edge-avoidance procedure. Comput Vis Image Und. 2009;113(4):511–531.

Jodoin P-M, Mignotte M, Rosenberger C. Segmentation framework based on a label field fusion. IEEE Trans Image Process. 2007;16(10):2535–2550.

Jodoin P-M, Mignotte M, Konrad J. Statistical background subtraction methods using spatial cues. IEEE Trans Circuits Syst Video Technol. 2007;17(12):1758–1763.

Jodoin P-M, Mignotte M. Markovian segmentation and parameter estimation on graphics hardware. J Electron Imaging. 2006;15(3):330–345.

Ostromoukhov V, Donohue C, Jodoin P-M. Fast hierarchical importance sampling with blue noise properties. SIGGRAPH. 2004;23(3):488–495.

Other publications of interest

Rojas-Vite G, Coronado-Leija R, Narvaez-Delgado O, Ramírez-Manzanares A, Marroquín JL, Noguez-Imm R, Aranda ML, Scherrer B, Larriva-Sahd J, Concha L. Histological validation of per-bundle water diffusion metrics within a region of fiber crossing following axonal degeneration. Neuroimage. 2019;201:116013.

Ji F, Pasternak O, Liu S, Loke YM, Choo BL, Hilal S, Xu X, Ikram MK, Venketasubramanian N, Chen CL-H, Zhou J. Distinct white matter microstructural abnormalities and extracellular water increases relate to cognitive impairment in Alzheimer’s disease with and without cerebrovascular disease. Alzheimers Res Ther. 2017;9(1).

Pasternak O, Westin C-F, Bouix S, Seidman LJ, Goldstein JM, Woo T-UW, Petryshen TL, Mesholam-Gately RI, McCarley RW, Kikinis R, Shenton ME, Kubicki M. Excessive extracellular volume reveals a neurodegenerative pattern in schizophrenia onset. J Neurosci. 2012;32(48):17365–17372.

Pasternak O, Sochen N, Gur Y, Intrator N, Assaf Y. Free water elimination and mapping from diffusion MRI. Magn Reson Med. 2009;62(3):717–730.

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